HRGM_Genome_1699 - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00002_HRGM_G.. (original name was: HRGM_Genome_1699_2) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	bacteriocin	137,511	147,423

c00018_HRGM_G.. (original name was: HRGM_Genome_1699_18) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	betalactone	45,555	71,254

c00028_HRGM_G.. (original name was: HRGM_Genome_1699_28) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	thiopeptide	1	21,728	O-antigen	Saccharide	14%

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	bacteriocin	137,511	147,423
Region 18.1	betalactone	45,555	71,254
Region 28.1	thiopeptide	1	21,728	O-antigen	Saccharide	14%

No secondary metabolite regions were found in these records:: c00001_HRGM_G.. (original name was: HRGM_Genome_1699_1) (Genus species); c00003_HRGM_G.. (original name was: HRGM_Genome_1699_3) (Genus species); c00004_HRGM_G.. (original name was: HRGM_Genome_1699_4) (Genus species); c00005_HRGM_G.. (original name was: HRGM_Genome_1699_5) (Genus species); c00006_HRGM_G.. (original name was: HRGM_Genome_1699_6) (Genus species); c00007_HRGM_G.. (original name was: HRGM_Genome_1699_7) (Genus species); c00008_HRGM_G.. (original name was: HRGM_Genome_1699_8) (Genus species); c00009_HRGM_G.. (original name was: HRGM_Genome_1699_9) (Genus species); c00010_HRGM_G.. (original name was: HRGM_Genome_1699_10) (Genus species); c00011_HRGM_G.. (original name was: HRGM_Genome_1699_11) (Genus species); c00012_HRGM_G.. (original name was: HRGM_Genome_1699_12) (Genus species); c00013_HRGM_G.. (original name was: HRGM_Genome_1699_13) (Genus species); c00014_HRGM_G.. (original name was: HRGM_Genome_1699_14) (Genus species); c00015_HRGM_G.. (original name was: HRGM_Genome_1699_15) (Genus species); c00016_HRGM_G.. (original name was: HRGM_Genome_1699_16) (Genus species); c00017_HRGM_G.. (original name was: HRGM_Genome_1699_17) (Genus species); c00019_HRGM_G.. (original name was: HRGM_Genome_1699_19) (Genus species); c00020_HRGM_G.. (original name was: HRGM_Genome_1699_20) (Genus species); c00021_HRGM_G.. (original name was: HRGM_Genome_1699_21) (Genus species); c00022_HRGM_G.. (original name was: HRGM_Genome_1699_22) (Genus species); c00023_HRGM_G.. (original name was: HRGM_Genome_1699_23) (Genus species); c00024_HRGM_G.. (original name was: HRGM_Genome_1699_24) (Genus species); c00025_HRGM_G.. (original name was: HRGM_Genome_1699_25) (Genus species); c00026_HRGM_G.. (original name was: HRGM_Genome_1699_26) (Genus species); c00027_HRGM_G.. (original name was: HRGM_Genome_1699_27) (Genus species); c00029_HRGM_G.. (original name was: HRGM_Genome_1699_29) (Genus species); c00030_HRGM_G.. (original name was: HRGM_Genome_1699_30) (Genus species); c00031_HRGM_G.. (original name was: HRGM_Genome_1699_31) (Genus species); c00032_HRGM_G.. (original name was: HRGM_Genome_1699_32) (Genus species); c00033_HRGM_G.. (original name was: HRGM_Genome_1699_33) (Genus species); c00034_HRGM_G.. (original name was: HRGM_Genome_1699_34) (Genus species); c00035_HRGM_G.. (original name was: HRGM_Genome_1699_35) (Genus species); c00036_HRGM_G.. (original name was: HRGM_Genome_1699_36) (Genus species); c00037_HRGM_G.. (original name was: HRGM_Genome_1699_37) (Genus species); c00038_HRGM_G.. (original name was: HRGM_Genome_1699_38) (Genus species); c00039_HRGM_G.. (original name was: HRGM_Genome_1699_39) (Genus species); c00040_HRGM_G.. (original name was: HRGM_Genome_1699_40) (Genus species); c00041_HRGM_G.. (original name was: HRGM_Genome_1699_41) (Genus species); c00042_HRGM_G.. (original name was: HRGM_Genome_1699_42) (Genus species); c00043_HRGM_G.. (original name was: HRGM_Genome_1699_43) (Genus species); c00044_HRGM_G.. (original name was: HRGM_Genome_1699_44) (Genus species); c00045_HRGM_G.. (original name was: HRGM_Genome_1699_45) (Genus species); c00046_HRGM_G.. (original name was: HRGM_Genome_1699_46) (Genus species); c00047_HRGM_G.. (original name was: HRGM_Genome_1699_47) (Genus species); c00048_HRGM_G.. (original name was: HRGM_Genome_1699_48) (Genus species); c00049_HRGM_G.. (original name was: HRGM_Genome_1699_49) (Genus species); c00050_HRGM_G.. (original name was: HRGM_Genome_1699_50) (Genus species); c00051_HRGM_G.. (original name was: HRGM_Genome_1699_51) (Genus species); c00052_HRGM_G.. (original name was: HRGM_Genome_1699_52) (Genus species); c00053_HRGM_G.. (original name was: HRGM_Genome_1699_53) (Genus species); c00054_HRGM_G.. (original name was: HRGM_Genome_1699_54) (Genus species); c00055_HRGM_G.. (original name was: HRGM_Genome_1699_55) (Genus species); c00056_HRGM_G.. (original name was: HRGM_Genome_1699_56) (Genus species); c00057_HRGM_G.. (original name was: HRGM_Genome_1699_57) (Genus species); c00058_HRGM_G.. (original name was: HRGM_Genome_1699_58) (Genus species); c00059_HRGM_G.. (original name was: HRGM_Genome_1699_59) (Genus species); c00060_HRGM_G.. (original name was: HRGM_Genome_1699_60) (Genus species); c00061_HRGM_G.. (original name was: HRGM_Genome_1699_61) (Genus species); c00062_HRGM_G.. (original name was: HRGM_Genome_1699_62) (Genus species); c00063_HRGM_G.. (original name was: HRGM_Genome_1699_63) (Genus species); c00064_HRGM_G.. (original name was: HRGM_Genome_1699_64) (Genus species); c00065_HRGM_G.. (original name was: HRGM_Genome_1699_65) (Genus species); c00066_HRGM_G.. (original name was: HRGM_Genome_1699_66) (Genus species); c00067_HRGM_G.. (original name was: HRGM_Genome_1699_67) (Genus species); c00068_HRGM_G.. (original name was: HRGM_Genome_1699_68) (Genus species); c00069_HRGM_G.. (original name was: HRGM_Genome_1699_69) (Genus species); c00070_HRGM_G.. (original name was: HRGM_Genome_1699_70) (Genus species); c00071_HRGM_G.. (original name was: HRGM_Genome_1699_71) (Genus species); c00072_HRGM_G.. (original name was: HRGM_Genome_1699_72) (Genus species); c00073_HRGM_G.. (original name was: HRGM_Genome_1699_73) (Genus species); c00074_HRGM_G.. (original name was: HRGM_Genome_1699_74) (Genus species); c00075_HRGM_G.. (original name was: HRGM_Genome_1699_75) (Genus species); c00076_HRGM_G.. (original name was: HRGM_Genome_1699_76) (Genus species); c00077_HRGM_G.. (original name was: HRGM_Genome_1699_77) (Genus species); c00078_HRGM_G.. (original name was: HRGM_Genome_1699_78) (Genus species); c00079_HRGM_G.. (original name was: HRGM_Genome_1699_79) (Genus species); c00080_HRGM_G.. (original name was: HRGM_Genome_1699_80) (Genus species); c00081_HRGM_G.. (original name was: HRGM_Genome_1699_81) (Genus species); c00082_HRGM_G.. (original name was: HRGM_Genome_1699_82) (Genus species); c00083_HRGM_G.. (original name was: HRGM_Genome_1699_83) (Genus species); c00084_HRGM_G.. (original name was: HRGM_Genome_1699_84) (Genus species); c00085_HRGM_G.. (original name was: HRGM_Genome_1699_85) (Genus species); c00086_HRGM_G.. (original name was: HRGM_Genome_1699_86) (Genus species); c00087_HRGM_G.. (original name was: HRGM_Genome_1699_87) (Genus species); c00088_HRGM_G.. (original name was: HRGM_Genome_1699_88) (Genus species); c00089_HRGM_G.. (original name was: HRGM_Genome_1699_89) (Genus species); c00090_HRGM_G.. (original name was: HRGM_Genome_1699_90) (Genus species); c00091_HRGM_G.. (original name was: HRGM_Genome_1699_91) (Genus species); c00092_HRGM_G.. (original name was: HRGM_Genome_1699_92) (Genus species); c00093_HRGM_G.. (original name was: HRGM_Genome_1699_93) (Genus species); c00094_HRGM_G.. (original name was: HRGM_Genome_1699_94) (Genus species); c00095_HRGM_G.. (original name was: HRGM_Genome_1699_95) (Genus species); c00096_HRGM_G.. (original name was: HRGM_Genome_1699_96) (Genus species); c00097_HRGM_G.. (original name was: HRGM_Genome_1699_97) (Genus species); c00098_HRGM_G.. (original name was: HRGM_Genome_1699_98) (Genus species); c00099_HRGM_G.. (original name was: HRGM_Genome_1699_99) (Genus species); c00100_HRGM_G.. (original name was: HRGM_Genome_1699_100) (Genus species); c00101_HRGM_G.. (original name was: HRGM_Genome_1699_101) (Genus species)

Compact view

c00002_HRGM_G.. - Region 1 - bacteriocin

Download region GenBank file

Location: 137,511 - 147,423 nt. (total: 9,913 nt) Show pHMM detection rules used

Region on contig edge.

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00018_HRGM_G.. - Region 1 - betalactone

Download region GenBank file

Location: 45,555 - 71,254 nt. (total: 25,700 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

ClusterBlast

KnownClusterBlast

SubClusterBlast

Similar gene clusters

Similar known gene clusters

No matches found.

Similar subclusters

No matches found.

c00028_HRGM_G.. - Region 1 - thiopeptide

Download region GenBank file

Location: 1 - 21,728 nt. (total: 21,728 nt) Show pHMM detection rules used

Region on contig edge.

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Thiopeptides

ClusterBlast

KnownClusterBlast

SubClusterBlast

Thiopeptide predictions

No core peptides found.

Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.

Thiopeptides

Core peptide predictions

No core peptides found.