HRGM_Genome_4547 - 1 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00011_HRGM_G.. (original name was: HRGM_Genome_4547_11) (Genus species)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	NRPS	1	22,708	N-octanoyl-Met-Phe-H	NRP	22%

No secondary metabolite regions were found in these records:: c00001_HRGM_G.. (original name was: HRGM_Genome_4547_1) (Genus species); c00002_HRGM_G.. (original name was: HRGM_Genome_4547_2) (Genus species); c00003_HRGM_G.. (original name was: HRGM_Genome_4547_3) (Genus species); c00004_HRGM_G.. (original name was: HRGM_Genome_4547_4) (Genus species); c00005_HRGM_G.. (original name was: HRGM_Genome_4547_5) (Genus species); c00006_HRGM_G.. (original name was: HRGM_Genome_4547_6) (Genus species); c00007_HRGM_G.. (original name was: HRGM_Genome_4547_7) (Genus species); c00008_HRGM_G.. (original name was: HRGM_Genome_4547_8) (Genus species); c00009_HRGM_G.. (original name was: HRGM_Genome_4547_9) (Genus species); c00010_HRGM_G.. (original name was: HRGM_Genome_4547_10) (Genus species); c00012_HRGM_G.. (original name was: HRGM_Genome_4547_12) (Genus species); c00013_HRGM_G.. (original name was: HRGM_Genome_4547_13) (Genus species); c00014_HRGM_G.. (original name was: HRGM_Genome_4547_14) (Genus species); c00015_HRGM_G.. (original name was: HRGM_Genome_4547_15) (Genus species); c00016_HRGM_G.. (original name was: HRGM_Genome_4547_16) (Genus species); c00017_HRGM_G.. (original name was: HRGM_Genome_4547_17) (Genus species); c00018_HRGM_G.. (original name was: HRGM_Genome_4547_18) (Genus species); c00019_HRGM_G.. (original name was: HRGM_Genome_4547_19) (Genus species); c00020_HRGM_G.. (original name was: HRGM_Genome_4547_20) (Genus species); c00021_HRGM_G.. (original name was: HRGM_Genome_4547_21) (Genus species); c00022_HRGM_G.. (original name was: HRGM_Genome_4547_22) (Genus species); c00023_HRGM_G.. (original name was: HRGM_Genome_4547_23) (Genus species); c00024_HRGM_G.. (original name was: HRGM_Genome_4547_24) (Genus species); c00025_HRGM_G.. (original name was: HRGM_Genome_4547_25) (Genus species); c00026_HRGM_G.. (original name was: HRGM_Genome_4547_26) (Genus species); c00027_HRGM_G.. (original name was: HRGM_Genome_4547_27) (Genus species); c00028_HRGM_G.. (original name was: HRGM_Genome_4547_28) (Genus species); c00029_HRGM_G.. (original name was: HRGM_Genome_4547_29) (Genus species); c00030_HRGM_G.. (original name was: HRGM_Genome_4547_30) (Genus species); c00031_HRGM_G.. (original name was: HRGM_Genome_4547_31) (Genus species); c00032_HRGM_G.. (original name was: HRGM_Genome_4547_32) (Genus species); c00033_HRGM_G.. (original name was: HRGM_Genome_4547_33) (Genus species); c00034_HRGM_G.. (original name was: HRGM_Genome_4547_34) (Genus species); c00035_HRGM_G.. (original name was: HRGM_Genome_4547_35) (Genus species); c00036_HRGM_G.. (original name was: HRGM_Genome_4547_36) (Genus species); c00037_HRGM_G.. (original name was: HRGM_Genome_4547_37) (Genus species); c00038_HRGM_G.. (original name was: HRGM_Genome_4547_38) (Genus species); c00039_HRGM_G.. (original name was: HRGM_Genome_4547_39) (Genus species); c00040_HRGM_G.. (original name was: HRGM_Genome_4547_40) (Genus species); c00041_HRGM_G.. (original name was: HRGM_Genome_4547_41) (Genus species); c00042_HRGM_G.. (original name was: HRGM_Genome_4547_42) (Genus species); c00043_HRGM_G.. (original name was: HRGM_Genome_4547_43) (Genus species); c00044_HRGM_G.. (original name was: HRGM_Genome_4547_44) (Genus species); c00045_HRGM_G.. (original name was: HRGM_Genome_4547_45) (Genus species); c00046_HRGM_G.. (original name was: HRGM_Genome_4547_46) (Genus species); c00047_HRGM_G.. (original name was: HRGM_Genome_4547_47) (Genus species); c00048_HRGM_G.. (original name was: HRGM_Genome_4547_48) (Genus species); c00049_HRGM_G.. (original name was: HRGM_Genome_4547_49) (Genus species); c00050_HRGM_G.. (original name was: HRGM_Genome_4547_50) (Genus species); c00051_HRGM_G.. (original name was: HRGM_Genome_4547_51) (Genus species); c00052_HRGM_G.. (original name was: HRGM_Genome_4547_52) (Genus species); c00053_HRGM_G.. (original name was: HRGM_Genome_4547_53) (Genus species); c00054_HRGM_G.. (original name was: HRGM_Genome_4547_54) (Genus species); c00055_HRGM_G.. (original name was: HRGM_Genome_4547_55) (Genus species); c00056_HRGM_G.. (original name was: HRGM_Genome_4547_56) (Genus species); c00057_HRGM_G.. (original name was: HRGM_Genome_4547_57) (Genus species); c00058_HRGM_G.. (original name was: HRGM_Genome_4547_58) (Genus species); c00059_HRGM_G.. (original name was: HRGM_Genome_4547_59) (Genus species); c00060_HRGM_G.. (original name was: HRGM_Genome_4547_60) (Genus species); c00061_HRGM_G.. (original name was: HRGM_Genome_4547_61) (Genus species); c00062_HRGM_G.. (original name was: HRGM_Genome_4547_62) (Genus species); c00063_HRGM_G.. (original name was: HRGM_Genome_4547_63) (Genus species); c00064_HRGM_G.. (original name was: HRGM_Genome_4547_64) (Genus species); c00065_HRGM_G.. (original name was: HRGM_Genome_4547_65) (Genus species); c00066_HRGM_G.. (original name was: HRGM_Genome_4547_66) (Genus species); c00067_HRGM_G.. (original name was: HRGM_Genome_4547_67) (Genus species); c00068_HRGM_G.. (original name was: HRGM_Genome_4547_68) (Genus species); c00069_HRGM_G.. (original name was: HRGM_Genome_4547_69) (Genus species); c00070_HRGM_G.. (original name was: HRGM_Genome_4547_70) (Genus species); c00071_HRGM_G.. (original name was: HRGM_Genome_4547_71) (Genus species); c00072_HRGM_G.. (original name was: HRGM_Genome_4547_72) (Genus species); c00073_HRGM_G.. (original name was: HRGM_Genome_4547_73) (Genus species); c00074_HRGM_G.. (original name was: HRGM_Genome_4547_74) (Genus species); c00075_HRGM_G.. (original name was: HRGM_Genome_4547_75) (Genus species); c00076_HRGM_G.. (original name was: HRGM_Genome_4547_76) (Genus species); c00077_HRGM_G.. (original name was: HRGM_Genome_4547_77) (Genus species); c00078_HRGM_G.. (original name was: HRGM_Genome_4547_78) (Genus species); c00079_HRGM_G.. (original name was: HRGM_Genome_4547_79) (Genus species); c00080_HRGM_G.. (original name was: HRGM_Genome_4547_80) (Genus species); c00081_HRGM_G.. (original name was: HRGM_Genome_4547_81) (Genus species); c00082_HRGM_G.. (original name was: HRGM_Genome_4547_82) (Genus species); c00083_HRGM_G.. (original name was: HRGM_Genome_4547_83) (Genus species); c00084_HRGM_G.. (original name was: HRGM_Genome_4547_84) (Genus species); c00085_HRGM_G.. (original name was: HRGM_Genome_4547_85) (Genus species); c00086_HRGM_G.. (original name was: HRGM_Genome_4547_86) (Genus species); c00087_HRGM_G.. (original name was: HRGM_Genome_4547_87) (Genus species); c00088_HRGM_G.. (original name was: HRGM_Genome_4547_88) (Genus species); c00089_HRGM_G.. (original name was: HRGM_Genome_4547_89) (Genus species); c00090_HRGM_G.. (original name was: HRGM_Genome_4547_90) (Genus species); c00091_HRGM_G.. (original name was: HRGM_Genome_4547_91) (Genus species); c00092_HRGM_G.. (original name was: HRGM_Genome_4547_92) (Genus species); c00093_HRGM_G.. (original name was: HRGM_Genome_4547_93) (Genus species); c00094_HRGM_G.. (original name was: HRGM_Genome_4547_94) (Genus species); c00095_HRGM_G.. (original name was: HRGM_Genome_4547_95) (Genus species); c00096_HRGM_G.. (original name was: HRGM_Genome_4547_96) (Genus species); c00097_HRGM_G.. (original name was: HRGM_Genome_4547_97) (Genus species); c00098_HRGM_G.. (original name was: HRGM_Genome_4547_98) (Genus species); c00099_HRGM_G.. (original name was: HRGM_Genome_4547_99) (Genus species); c00100_HRGM_G.. (original name was: HRGM_Genome_4547_100) (Genus species); c00101_HRGM_G.. (original name was: HRGM_Genome_4547_101) (Genus species); c00102_HRGM_G.. (original name was: HRGM_Genome_4547_102) (Genus species); c00103_HRGM_G.. (original name was: HRGM_Genome_4547_103) (Genus species); c00104_HRGM_G.. (original name was: HRGM_Genome_4547_104) (Genus species); c00105_HRGM_G.. (original name was: HRGM_Genome_4547_105) (Genus species); c00106_HRGM_G.. (original name was: HRGM_Genome_4547_106) (Genus species); c00107_HRGM_G.. (original name was: HRGM_Genome_4547_107) (Genus species); c00108_HRGM_G.. (original name was: HRGM_Genome_4547_108) (Genus species); c00109_HRGM_G.. (original name was: HRGM_Genome_4547_109) (Genus species); c00110_HRGM_G.. (original name was: HRGM_Genome_4547_110) (Genus species); c00111_HRGM_G.. (original name was: HRGM_Genome_4547_111) (Genus species); c00112_HRGM_G.. (original name was: HRGM_Genome_4547_112) (Genus species); c00113_HRGM_G.. (original name was: HRGM_Genome_4547_113) (Genus species); c00114_HRGM_G.. (original name was: HRGM_Genome_4547_114) (Genus species); c00115_HRGM_G.. (original name was: HRGM_Genome_4547_115) (Genus species); c00116_HRGM_G.. (original name was: HRGM_Genome_4547_116) (Genus species); c00117_HRGM_G.. (original name was: HRGM_Genome_4547_117) (Genus species); c00118_HRGM_G.. (original name was: HRGM_Genome_4547_118) (Genus species); c00119_HRGM_G.. (original name was: HRGM_Genome_4547_119) (Genus species); c00120_HRGM_G.. (original name was: HRGM_Genome_4547_120) (Genus species); c00121_HRGM_G.. (original name was: HRGM_Genome_4547_121) (Genus species); c00122_HRGM_G.. (original name was: HRGM_Genome_4547_122) (Genus species); c00123_HRGM_G.. (original name was: HRGM_Genome_4547_123) (Genus species); c00124_HRGM_G.. (original name was: HRGM_Genome_4547_124) (Genus species); c00125_HRGM_G.. (original name was: HRGM_Genome_4547_125) (Genus species); c00126_HRGM_G.. (original name was: HRGM_Genome_4547_126) (Genus species); c00127_HRGM_G.. (original name was: HRGM_Genome_4547_127) (Genus species); c00128_HRGM_G.. (original name was: HRGM_Genome_4547_128) (Genus species); c00129_HRGM_G.. (original name was: HRGM_Genome_4547_129) (Genus species); c00130_HRGM_G.. (original name was: HRGM_Genome_4547_130) (Genus species); c00131_HRGM_G.. (original name was: HRGM_Genome_4547_131) (Genus species); c00132_HRGM_G.. (original name was: HRGM_Genome_4547_132) (Genus species); c00133_HRGM_G.. (original name was: HRGM_Genome_4547_133) (Genus species); c00134_HRGM_G.. (original name was: HRGM_Genome_4547_134) (Genus species); c00135_HRGM_G.. (original name was: HRGM_Genome_4547_135) (Genus species); c00136_HRGM_G.. (original name was: HRGM_Genome_4547_136) (Genus species); c00137_HRGM_G.. (original name was: HRGM_Genome_4547_137) (Genus species); c00138_HRGM_G.. (original name was: HRGM_Genome_4547_138) (Genus species); c00139_HRGM_G.. (original name was: HRGM_Genome_4547_139) (Genus species); c00140_HRGM_G.. (original name was: HRGM_Genome_4547_140) (Genus species); c00141_HRGM_G.. (original name was: HRGM_Genome_4547_141) (Genus species); c00142_HRGM_G.. (original name was: HRGM_Genome_4547_142) (Genus species); c00143_HRGM_G.. (original name was: HRGM_Genome_4547_143) (Genus species); c00144_HRGM_G.. (original name was: HRGM_Genome_4547_144) (Genus species); c00145_HRGM_G.. (original name was: HRGM_Genome_4547_145) (Genus species); c00146_HRGM_G.. (original name was: HRGM_Genome_4547_146) (Genus species); c00147_HRGM_G.. (original name was: HRGM_Genome_4547_147) (Genus species); c00148_HRGM_G.. (original name was: HRGM_Genome_4547_148) (Genus species); c00149_HRGM_G.. (original name was: HRGM_Genome_4547_149) (Genus species); c00150_HRGM_G.. (original name was: HRGM_Genome_4547_150) (Genus species); c00151_HRGM_G.. (original name was: HRGM_Genome_4547_151) (Genus species); c00152_HRGM_G.. (original name was: HRGM_Genome_4547_152) (Genus species); c00153_HRGM_G.. (original name was: HRGM_Genome_4547_153) (Genus species); c00154_HRGM_G.. (original name was: HRGM_Genome_4547_154) (Genus species); c00155_HRGM_G.. (original name was: HRGM_Genome_4547_155) (Genus species); c00156_HRGM_G.. (original name was: HRGM_Genome_4547_156) (Genus species); c00157_HRGM_G.. (original name was: HRGM_Genome_4547_157) (Genus species); c00158_HRGM_G.. (original name was: HRGM_Genome_4547_158) (Genus species); c00159_HRGM_G.. (original name was: HRGM_Genome_4547_159) (Genus species); c00160_HRGM_G.. (original name was: HRGM_Genome_4547_160) (Genus species); c00161_HRGM_G.. (original name was: HRGM_Genome_4547_161) (Genus species); c00162_HRGM_G.. (original name was: HRGM_Genome_4547_162) (Genus species); c00163_HRGM_G.. (original name was: HRGM_Genome_4547_163) (Genus species); c00164_HRGM_G.. (original name was: HRGM_Genome_4547_164) (Genus species); c00165_HRGM_G.. (original name was: HRGM_Genome_4547_165) (Genus species); c00166_HRGM_G.. (original name was: HRGM_Genome_4547_166) (Genus species); c00167_HRGM_G.. (original name was: HRGM_Genome_4547_167) (Genus species); c00168_HRGM_G.. (original name was: HRGM_Genome_4547_168) (Genus species); c00169_HRGM_G.. (original name was: HRGM_Genome_4547_169) (Genus species); c00170_HRGM_G.. (original name was: HRGM_Genome_4547_170) (Genus species); c00171_HRGM_G.. (original name was: HRGM_Genome_4547_171) (Genus species); c00172_HRGM_G.. (original name was: HRGM_Genome_4547_172) (Genus species); c00173_HRGM_G.. (original name was: HRGM_Genome_4547_173) (Genus species); c00174_HRGM_G.. (original name was: HRGM_Genome_4547_174) (Genus species); c00175_HRGM_G.. (original name was: HRGM_Genome_4547_175) (Genus species); c00176_HRGM_G.. (original name was: HRGM_Genome_4547_176) (Genus species); c00177_HRGM_G.. (original name was: HRGM_Genome_4547_177) (Genus species); c00178_HRGM_G.. (original name was: HRGM_Genome_4547_178) (Genus species); c00179_HRGM_G.. (original name was: HRGM_Genome_4547_179) (Genus species); c00180_HRGM_G.. (original name was: HRGM_Genome_4547_180) (Genus species); c00181_HRGM_G.. (original name was: HRGM_Genome_4547_181) (Genus species)

Compact view

c00011_HRGM_G.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 22,708 nt. (total: 22,708 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

ClusterBlast

KnownClusterBlast

SubClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Similar known gene clusters

Similar subclusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 22708:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

HRGM_Genome_4547_CDS_00296

Search NORINE for peptide: strict or relaxed

AMP-binding (455..821): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DMvlqGGaCK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 60% (weak)

AMP-binding (1439..1821): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DifqSimVGK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 50% (weak)