MRGM (Mouse Reference Gut Microbiome)

is a mouse gut microbiome catalog. The MRGM provides 42,245 nonredundant genomes (>=90 completeness and <=5% contamination) for 1,524 prokaryotic species, sequence and functional information for 1.7 million nonredundant proteins. MRGM also provides custom database for Kraken2 database, and MetaPhlAn, facilitating taxonomic classification of metagenomic sequencing reads.

Users can browse and download entire dataset of MRGM on Navigate tab.

Citation

MRGM: An enhanced catalog of mouse gut microbial genomes substantially broadening taxonomic and functional landscapes Submitted bioRxiv